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Articles by A. Basso
Total Records ( 3 ) for A. Basso
  A. Onasanya , A. Basso , E. Somado , E.R. Gasore , F.E. Nwilene , I. Ingelbrecht , J. Lamo , K. Wydra , M.M. Ekperigin , M. Langa , O. Oyelakin , Y. Sere , S. Winter and R.O. Onasanya
 

Case No: 26082013

This article has been withdrawn due to technical issue.

  A. Onasanya , P. Kiepe , A. Basso , G. Nkima , F.E. Nwilene , I. Ingelbrecht , J. Lamo , M.M. Ekperigin , R.O. Onasanya , O. Oyelakin , S. Winter and Y. Sere
  Genomic DNA fingerprinting is a useful tool for effective and reliable identification and differentiation of Xanthomonas oryzae pv. oryzae (Xoo) pathogen from rice. The study aimed to conduct molecular characterization and DNA fingerprinting of 23 Xoo isolates from East Africa and two Xoo isolates from IRRI (Philippines) as control. PCR analysis was carryout on genomic DNA of 25 Xoo isolates using 6 Xoo specific primer pairs. Cluster analyses of genetic data obtained from 25 Xoo DNA fingerprints revealed two major genotypes (GrpA and GrpB) among the 25 Xoo isolates. GrpA has three subgroups (GrpA1; GrpA2; GrpA3) and GrpB (GrpB1; GrpB2; GrpB3). GrpA genotype consists of 20 Xoo isolates from Uganda, Rwanda and Philippines while GrpB genotype has 5 Xoo isolates from Rwanda. Some Xoo isolates were identical (PX-1, PX-2; UX621, RX2101; RX554, UX623, RX4113; UX211, UX213, UX214, RX4112, UX215). The emergence of subgroup genotypes could possibly be due to mutations and interactions among isolates and strains in host cells. Some Xoo isolates from Rwanda and Uganda were identical suggesting possible pathogen migration between these countries and long-term survival. Durable resistance rice cultivars would need to overcome both GrpA and GrpB Xoo genotypes in order to survive after their deployment into different rice ecologies in East Africa.
  S. Issaka , A. Onasanya , A. Basso , F. Sorho , A. Haougui , A.Y. Sido , S. Ake , D. Fargette and Y. Sere
  This study has been conducted in screen house with an aim to asses the Rice yellow mottle virus pathogenic diversity and the level of resistance of released varieties in Niger republic. Sixty RYMV isolates from 23 Niger rice perimeters were inoculated mechanically to nine rice cultivars. The disease symptoms were scored at 42 days after inoculation. Analysis of Variance (ANOVA) and Additive Main effect and Multiplicative Interaction (AMMI) analysis were performed on the percentage of severity. The reaction of the rice cultivars to the virus isolates was significantly different. The interaction between isolates and rice cultivars was also significant. AMMI cluster analysis revealed the existence of four major pathotypes (Path 1 to 4) of Rice Yellow Mottle Virus (RYMV) in Niger republic. Path 4 pathotype included 12 resistance breaking isolates (20%). Path 3 and Path 2 pathotypes consist of 15 and 26 isolates respectively and were typical of wild type isolates with moderate level of pathogeny, including none aggressive (path 3 = MP) and aggressive isolates (Path 2 = MPA). The fourth pathotype Path 1 was made of 7 isolates and typical of particular isolates which have a moderate pathogenic level (FP). Resistance Breaking (RB) isolates occupied 30% of Niger rice ecologies in variable proportion. The rice varieties (Bassiroumo, IR15-29-690-3-1 and Kassoumo) released in Niger were highly susceptible to RYMV and therefore constituted a favorable condition for the rice yellow mottle disease propagation. This information is useful in rice breeding programs in the development and deployment of RYMV resistant cultivars to different rice perimeters in Niger Republic.
 
 
 
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