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Journal of Biological Sciences

Year: 2008 | Volume: 8 | Issue: 2 | Page No.: 392-397
DOI: 10.3923/jbs.2008.392.397
High Resolution Allotyping of Four Alleles of HLA-DRB1*01 Group in Iranians Using Reverse-SSOPH Assay in Comparison with DNA Sequencing and PCR-SSP
Majid Safa, Mehdi Forouzandeh, Aliakbar Pourfathollah, Pooria Gill, Mohammad Javad Rasaee, Fatemeh Yari, Atefeh Shahbazi, Mohammad Soleiman Soltanpour and Neema Mayor

Abstract: Described here an amplification-based Sequence Specific Oligonucleotide Probe Hybridization (SSOPH) assay for high resolution allotyping of four HLA DRB1*01 group alleles. A region within exon 2 of HLA DRB1 gene was amplified by using group specific biotin-labeled primers. The amplicons were then hybridized to immobilized oligonucleotide probes that were specific for HLA DRB1*01 group alleles (HLA DRB1*0101, *0102, *0103 and *0104). The Hybridized amplicons were detected by an enzymatic-colorimetric reaction. One hundred and fifty DNA samples were tested by this method, in parallel with PCR-SSP and DNA sequencing for demonstrating the accuracy of the Reverse Dot Blot (RDB). Results suggested that PCR-RDB is a rapid, accurate and cost effective method for high resolution HLA molecular typing in comparison to PCR-SSP and DNA sequencing.

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How to cite this article
Majid Safa, Mehdi Forouzandeh, Aliakbar Pourfathollah, Pooria Gill, Mohammad Javad Rasaee, Fatemeh Yari, Atefeh Shahbazi, Mohammad Soleiman Soltanpour and Neema Mayor, 2008. High Resolution Allotyping of Four Alleles of HLA-DRB1*01 Group in Iranians Using Reverse-SSOPH Assay in Comparison with DNA Sequencing and PCR-SSP. Journal of Biological Sciences, 8: 392-397.

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